O2k-Publications 2005

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	Year	Reference
Mahn 2005 FASEB J	2005	Mahn K, Borrás C, Knock GA, Taylor P, Khan IY, Sugden D, Poston L, Ward JP, Sharpe RM, Viña J, Aaronson PI, Mann GE (2005) Dietary soy isoflavone induced increases in antioxidant and eNOS gene expression lead to improved endothelial function and reduced blood pressure in vivo. FASEB J 19:1755-7.
Tretter 2005 Philos Trans R Soc Lond B Biol Sci	2005	Tretter L, Adam-Vizi V (2005) Alpha-ketoglutarate dehydrogenase: a target and generator of oxidative stress. Philos Trans R Soc Lond B Biol Sci 360:2335-45.
Sipos 2005 Cell Mol Neurobiol	2005	Sipos I, Törocsik B, Tretter L, Adam-Vizi V (2005) Impaired regulation of pH homeostasis by oxidative stress in rat brain capillary endothelial cells. Cell Mol Neurobiol 25:141-51.
Gong 2005 Am J Physiol Cell Physiol	2005	Gong Y, Agani FH (2005) Oligomycin inhibits HIF-1alpha expression in hypoxic tumor cells. Am J Physiol Cell Physiol 288(5):C1023-9.
Sureda 2005 Free Radic Res	2005	Sureda A, Tauler P, Aguilo A, Cases N, Fuentespina E, Cordova A, Tur JA, Pons A (2005) Relation between oxidative stress markers and antioxidant endogenous defences during exhaustive exercise. Free Radic Res 39:1317-24.
Pereira 2005 Genome Res	2005	Pereira L, Richards M, Goios A, Alonso A, Albarrán C, Garcia O, Behar DM, Gölge M, Hatina J, Al-Gazali L, Bradley DG, Macaulay V, Amorim A (2005) High-resolution mtDNA evidence for the late-glacial resettlement of Europe from an Iberian refugium. Genome Res 15:19-24..
Andreyev 2005 Biochemistry (Mosc)	2005	Andreyev AY, Kushnareva YE, Starkov AA (2005) Mitochondrial metabolism of reactive oxygen species. Biochemistry (Mosc) 70:200-14.
Anmann 2005 FEBS J	2005	Anmann T, Eimre M, Kuznetsov AV, Andrienko T, Kaambre T, Sikk P, Seppet E, Tiivel T, Vendelin M, Seppet EK, Saks VA (2005) Calcium-induced contraction of sarcomeres changes the regulation of mitochondrial respiration in permeabilized cardiac cells. FEBS J 272:3145-61.
Sanjuán-Pla 2005 FEBS Lett	2005	Sanjuan-Pla A, Cervera AM, Apostolova N, Garcia-Bou R, Victor VM, Murphy MP, McCreath KJ (2005) A targeted antioxidant reveals the importance of mitochondrial reactive oxygen species in the hypoxic signaling of HIF-1alpha. FEBS Lett 579:2669-74.
Weir 2005 N Engl J Med	2005	Weir EK, López-Barneo J, Buckler KJ, Archer SL (2005) Acute oxygen-sensing mechanisms. N Engl J Med 353:2042-55.
Moudgil 2005 J Appl Physiol (1985)	2005	Moudgil R, Michelakis ED, Archer SL (2005) Hypoxic pulmonary vasoconstriction. J Appl Physiol (1985) 98:390-403. https://doi.org/10.1152/japplphysiol.00733.2004
Maneiro 2005 Ann Rheum Dis	2005	Maneiro E, López-Armada MJ, de Andres MC, Caramés B, Martín MA, Bonilla A, Del Hoyo P, Galdo F, Arenas J, Blanco FJ (2005) Effect of nitric oxide on mitochondrial respiratory activity of human articular chondrocyte. Ann Rheum Dis 64:388-95.
Dawson 2005 J Physiol	2005	Dawson KD, Baker DJ, Greenhaff PL, Gibala MJ (2005) An accute decrease in TCA cycle intermediates does not affect aerobic energy delivery in contracting rat skeletal muscle. J Physiol 565:637-43.
Balaban 2005 Cell	2005	Balaban RS, Nemoto S, Finkel T (2005) Mitochondria, oxidants, and aging. Cell 120:483-95. https://doi.org/10.1016/j.cell.2005.02.001
Hanley 2005 J Physiol	2005	Hanley PJ, Dröse S, Brandt U, Lareau RA, Banerjee AL, Srivastava DK, Banaszak LJ, Barycki JJ, Van Veldhoven PP, Daut J (2005) 5-Hydroxydecanoate is metabolised in mitochondria and creates a rate-limiting bottleneck for beta-oxidation of fatty acids. J Physiol 562:307-18.
Sun 2005 Cell	2005	Sun F, Huo X, Zhai Y, Wang A, Xu J, Su D, Bartlam M, Rao Z (2005) Crystal structure of mitochondrial respiratory membrane protein Complex II. Cell 121:1043–57. https://doi.org/10.1016/j.cell.2005.05.025
Heerlein 2005 Am J Respir Cell Mol Biol	2005	Heerlein K, Schulze A, Hotz L, Bartsch P, Mairbäurl H (2005) Hypoxia decreases cellular ATP demand and inhibits mitochondrial respiration of a549 cells. Am J Respir Cell Mol Biol 32:44-51.
Garait 2005 Free Radic Biol Med	2005	Garait B, Couturier K, Servais S, Letexier D, Perrin D, Batandier C, Rouanet J-L, Sibille B, Rey B, Leverve X, Favier R (2005) Fat intake reverses the beneficial effects of low caloric intake on skeletal muscle mitochondrial H2O2 production. Free Radic Biol Med 39:1249–61.
Beard 2005 PLOS Comput Biol	2005	Beard DA (2005) A biophysical model of the mitochondrial respiratory system and oxidative phosphorylation. PLoS Comput Biol 1(4):e36.
Beardall 2005 Can J Bot	2005	Beardall J, Roberts S, Raven JA (2005) Regulation of inorganic carbon acquisition by phosphorus limitation in the green alga Chlorella emersonii. Can J Bot 83:859-64.
Brunelle 2005 Cell Metab	2005	Brunelle JK, Bell EL, Quesada NM, Vercauteren K, Tiranti V, Zeviani M, Scarpulla RC, Chandel NS (2005) Oxygen sensing requires mitochondrial ROS but not oxidative phosphorylation. Cell Metab 1(6):409-14.
Doeller 2005 Anal Biochem	2005	Doeller JE, Isbell TS, Benavides G, Koenitzer J, Patel H, Patel RP, Lancaster JR Jr, Darley-Usmar VM, Kraus DW (2005) Polarographic measurement of hydrogen sulfide production and consumption by mammalian tissues. Anal Biochem 341:40-51.
Rauchova 2005 Biochem Biophys Res Comm	2005	Rauchova H, Vrbacky M, Bergamini C, Fato R, Lenaz G, Houstek J, Drahota Z (2005) Inhibition of glycerophosphate-dependent H2O2 generation in brown fat mitochondria by idebenone. Biochem Biophys Res Comm 339:362-6.
Oezen 2005 Hum Mol Genet	2005	Oezen I, Rossmanith W, Forss-Petter S, Kemp S, Voigtlander T, Moser-Thier K, Wanders RJA, Bittner RE, Berger J (2005) Accumulation of very long-chain fatty acids does not affect mitochondrial function in adrenoleukodystrophy protein deficiency. Hum Mol Genet 14:1127-37.
Zacharovova 2005 Transplant Proc	2005	Zacharovova K, Berkova Z, Spacek T, Kriz J, Dovolilova E, Girman P, Koblas T, Jezek P, Saudek F (2005) In vitro assessment of pancreatic islet vitality by oxymetry. Transplant Proc 37:3454-6.
Justo 2005 Am J Physiol Cell Physiol	2005	Justo R, Boada J, Frontera M, Oliver J, Bermudez J, Gianotti M (2005) Gender dimorphism in rat liver mitochondrial oxidative metabolism and biogenesis. Am J Physiol Cell Physiol 289:372-8
Short 2005 Proc Natl Acad Sci U S A	2005	Short KR, Bigelow ML, Kahl J, Singh R, Coenen-Schimke J, Raghavakaimal S, Nair KS (2005) Decline in skeletal muscle mitochondrial function with aging in humans. Proc Natl Acad Sci U S A 102:5618-23.
Capel 2005 Mech Ageing Develop	2005	Capel F, Rimbert V, Lioger D, Diot A, Rousset P, Patureau Mirand P, Boirie Y, Morio B, Mosoni L (2005) Due to reverse electron transfer, mitochondrial H2O2 release increases with age in human vastus lateralis muscle although oxidative capacity is preserved. Mech Ageing Develop 126:505-11.
Guerrero 2005 Am J Physiol Regul Integr Comp Physiol	2005	Guerrero K, Wuyam B, Mezin P, Vivodtzev I, Vendelin M, Borel JC, Hacini R, Chavanon O, Imbeaud S, Saks V, Pison C (2005) Functional coupling of adenine nucleotide translocase and mitochondrial creatine kinase is enhanced after exercise training in lung transplant skeletal muscle. Am J Physiol Regul Integr Comp Physiol 289:R1144-54.
Lee 2005 Am J Physiol Renal Physiol	2005	Lee WK, Bork U, Gholamrezaei F, Thévenod F (2005) Cd2+-induced cytochrome c release in apoptotic proximal tubule cells: role of mitochondrial permeability transition pore and Ca2+ uniporter. Am J Physiol Renal Physiol 288:F27-39.
Borras 2005 Aging Cell	2005	Borrás C, Gambini J, Gómez-Cabrera MC, Sastre J, Pallardó FV, Mann GE, Viña J (2005) 17beta-oestradiol up-regulates longevity-related, antioxidant enzyme expression via the ERK1 and ERK2[MAPK]/NFkappaB cascade. Aging Cell 4:113-8.
Boxma 2005 Nature	2005	Boxma B, de Graaf RM, van der Staay GW, van Alen TA, Ricard G, Gabaldón T, van Hoek AH, Moon-van der Staay SY, Koopman WJ, van Hellemond JJ, Tielens AG, Friedrich T, Veenhuis M, Huynen MA, Hackstein JH (2005) An anaerobic mitochondrion that produces hydrogen. Nature 434:74-9..
David 2005 J Biol Chem	2005	David DC, Hauptmann S, Scherping I, Schuessel K, Keil U, Rizzu P, Ravid R, Dröse S, Brandt U, Muller WE, Eckert A, Götz J (2005) Proteomic and functional analysis reveal a mitochondrial dysfunction in P301L tau transgenic mice. J Biol Chem 280:23802-14.
Carroll 2005 J Biol Chem	2005	Carroll AM, Haines LR, Pearson TW, Fallon PG, Walsh CM, Brennan CM, Breen EP, Porter RK (2005) Identification of a functioning mitochondrial uncoupling protein 1 in thymus. J Biol Chem 280:15534-43.
Mansfield 2005 Cell Metab	2005	Mansfield KD, Guzy RD, Pan Y, Young RM, Cash TP, Schumacker PT, Simon MC (2005) Mitochondrial dysfunction resulting from loss of cytochrome c impairs cellular oxygen sensing and hypoxic HIF-alpha activation. Cell Metab 1:393-9.
Drahota 2005 Physiol Res	2005	Drahota Z, Krivakova P, Cervinkova Z, Kmonickova E, Lotkova H, Kucera O, Houstek J (2005) Tert-butyl hydroperoxide selectively inhibits mitochondrial respiratory-chain enzymes in isolated rat hepatocytes. Physiol Res 54:67-72.
Guzy 2005 Cell Metab	2005	Guzy RD, Hoyos B, Robin E, Chen H, Liu L, Mansfield KD, Simon MC, Hammerling U, Schumacker PT (2005) Mitochondrial complex III is required for hypoxia-induced ROS production and cellular oxygen sensing. Cell Metab 1:401-8.
Gizatullina 2005 Biochim Biophys Acta	2005	Gizatullina ZZ, Chen Y, Zierz S, Gellerich FN (2005) Effects of extramitochondrial ADP on permeability transition of mouse liver mitochondria. Biochim Biophys Acta 1706:98-104.
Chowdhury 2005 Biochem Biophys Res Comm	2005	Chowdhury SK, Gemin A, Singh G (2005) High activity of mitochondrial glycerophosphate dehydrogenase and glycerophosphate-dependent ROS production in prostate cancer cell lines. Biochem Biophys Res Comm 333:1139-45.
Headrick 2005 Science	2005	Headrick JM, Diken EG, Walters RS, Hammer NI, Christie RA, Cui J, Myshakin EM, Duncan MA, Johnson MA, Jordan KD (2005) Spectral signatures of hydrated proton vibrations in water clusters. Science 308:1765–69.
Chung 2005 Am J Physiol Cell Physiol	2005	Chung Y, Molé PA, Sailasuta N, Tran TK, Hurd R, Jue T (2005) Control of respiration and bioenergetics during muscle contraction. https://doi.org/10.1152/ajpcell.00138.2004
Segre 2005 Nat Genet	2005	Segrè D, DeLuna A, Church GM, Kishony R (2005) Modular epistasis in yeast metabolism. Nat Genet 37:77–83.
James 2005 J Biol Chem	2005	James AM, Cochemé HM, Smith RAJ, Murphy MP (2005) Interactions of mitochondria-targeted and untargeted ubiquinones with the mitochondrial respiratory chain and reactive oxygen species. Implications for the use of exogenous ubiquinones as therapies and experimental tools. J Biol Chem 280:21295-312.
Covi 2005 Thesis	2005	Covi JA (2005) V-ATPase expression and function in the brine shrimp, Artemia franciscana: Role of proton gradients in anoxia-induced quiescence. Graduate Faculty of the Louisiana State University and Agricultural and Mechanical College, Dept Biol Sc, PhD Thesis:1-101.
Jarmuszkiewicz 2005 Biochim Biophys Acta	2005	Jarmuszkiewicz W, Czarna M, Sluse FE (2005) Substrate kinetics of the Acanthamoeba castellanii alternative oxidase and the effects of GMP. Biochim Biophys Acta 1708:71-8.
Hervouet 2005 Carcinogenesis	2005	Hervouet E, Demont J, Pecina P, Vojtísková A, Houstek J, Simonnet H, Godinot C (2005) A new role for the von Hippel-Lindau tumor suppressor protein: Stimulation of mitochondrial oxidative phosphorylation complex biogenesis. Carcinogenesis 26:531-9.
Winkler-Stuck 2005 J Neural Transm	2005	Winkler-Stuck K, Kirches E, Mawrin C, Dietzmann K, Lins H, Wallesch CW, Kunz WS, Wiedemann FR (2005) Re-evaluation of the dysfunction of mitochondrial respiratory chain in skeletal muscle of patients with Parkinson's disease. J Neural Transm 112:499-518.
He 2005 Am J Physiol Lung Cell Mol Physiol	2005	He L, Dinger B, Sanders K, Hoidal J, Obeso A, Stensaas L, Fidone S, Gonzalez C (2005) Effect of p47phox gene deletion on ROS production and oxygen sensing in mouse carotid body chemoreceptor cells. Am J Physiol Lung Cell Mol Physiol 289:916-24.
Diverse Populations Collaborative Group 2005 Am J Phys Anthropol	2005	Diverse Populations Collaborative Group (2005) Weight-height relationships and body mass index: some observations from the Diverse Populations Collaboration. Am J Phys Anthropol 128:220-9.
Drahota 2005 Cell Biochem Biophys	2005	Drahota Z, Milerova M, Stieglerova A, Skarka L, Houstek J, Ostadal B (2005) Development of cytochrome-c oxidase in rat heart. Cell Biochem Biophys 43:87-94.
Pettersen 2005 Cell Prolif	2005	Pettersen EO, Larsen LH, Ramsing NB, Ebbesen P (2005) Pericellular oxygen depletion during ordinary tissue culturing, measured with oxygen microsensors. Cell Prolif 38:257-67.
Gueguen 2005 J Physiol	2005	Gueguen N, Lefaucheur L, Ecolan P, Fillaut M, Herpin P (2005) Ca2+-activated myosin-ATPases, creatine and adenylate kinases regulate mitochondrial function according to myofibre type in rabbit. J Physiol 564:723-35.
Seppet 2005 Mol Cell Biochem	2005	Seppet E, Eimre M, Peet N, Paju K, Orlova E, Ress M, Kovask S, Piirsoo A, Saks VA, Gellerich FN, Zierz S, Seppet EK (2005) Compartmentation of energy metabolism in atrial myocardium of patients undergoing cardiac surgery. Mol Cell Biochem 270:49-61.
Menshikova 2005 Am J Physiol Endocrinol Metab	2005	Menshikova EV, Ritov VB, Toledo FG, Ferrell RE, Goodpaster BH, Kelley DE (2005) Effects of weight loss and physical activity on skeletal muscle mitochondrial function in obesity. Am J Physiol Endocrinol Metab 288:E818-25.
Garnier 2005 FASEB J	2005	Garnier A, Fortin D, Zoll J, N'Guessan B, Mettauer B, Lampert E, Veksler V, Ventura-Clapier R (2005) Coordinated changes in mitochondrial function and biogenesis in healthy and diseased human skeletal muscle. FASEB J 19:43-52.
Fossbakk 2005 Anal Biochem	2005	Fossbakk A, Haavik J (2005) An oxygraphic method for determining kinetic properties and catalytic mechanism of aromatic amino acid hydroxylases. Anal Biochem 343:100-5.
Garedew 2005 Eur Shock Soc	2005	Garedew A, Hütter E, Haffner B, Gradl P, Gradl L, Jansen-Dürr P, Gnaiger E (2005) High-resolution respirometry for the study of mitochondrial function in health and disease. The Oroboros O2k. Proc 11th Congress Eur Shock Soc, Vienna, Austria (Redl H, ed) Medimond, Bologna:107-11.
Werner 2005 Arch Tierz Dummerstorf	2005	Werner C, Opalka JR, Gellerich FN, Wicke M (2005) The influence of mitochondrial function on meat quality in turkey and swine. Arch Tierz Dummerstorf 48 Special Issue: 106-114.
Gnaiger 2005 Mitochondr Physiol Network MiP2005	2005	Gnaiger E, ed (2005) Mitochondrial physiology. The many faces and functions of an organelle. MiP2005 Abstracts. Mitochondr Physiol Network 10.09:1-152.
Vinogradov 2005 Biochemistry (Mosc)	2005	Vinogradov AD, Grivennikova VG (2005) Generation of superoxide-radical by the NADH:ubiquinone oxidoreductase of heart mitochondria. Biochemistry (Mosc) 70:120-7.
Hekimoğlu 2005 zfv	2005	Hekimoğlu S (2005) Do robust methods identify outliers more reliably than conventional tests for outliers?. zfv 130(3):174-180.
Hinchliffe 2005 Science	2005	Hinchliffe P, Sazanov LA (2005) Organization of iron-sulfur clusters in respiratory complex I. Science 309:771-4. https://doi.org/10.1126/science.1113988
Hinkle 2005 Biochim Biophys Acta	2005	Hinkle PC (2005) P/O ratios of mitochondrial oxidative phosphorylation. Biochim Biophys Acta 1706:1-11.
Weibel 2005 J Exp Biol	2005	Weibel ER, Hoppeler H (2005) Exercise-induced maximal metabolic rate scales with muscle aerobic capacity. J Exp Biol 208:1635-44.
Huss 2005 J Clin Invest	2005	Huss JM, Kelly DP (2005) Mitochondrial energy metabolism in heart failure: a question of balance. J Clin Invest 115:547-55. https://doi.org/10.1172/JCI24405
Ioannidis 2005 PLoS Med	2005	Ioannidis JPA (2005) Why most published research findings are false. PLoS Med 2:e124. https://doi.org/10.1371/journal.pmed.0020124
Ter Veld 2005 FEBS J	2005	ter Veld F, Jeneson JA, Nicolay K (2005) Mitochondrial affinity for ADP is twofold lower in creatine kinase knock-out muscles. Possible role in rescuing cellular energy homeostasis. FEBS J 272:956-65.
Kaelin 2005 Cell Metab	2005	Kaelin WG Jr (2005) ROS: really involved in oxygen sensing. Cell Metab 1(6):357-8.
Kutschera 2005 Theory Biosci	2005	Kutschera U, Niklas KJ (2005) Endosymbiosis, cell evolution, and speciation. https://doi.org/10.1016/j.thbio.2005.04.001
Ponsot 2005 J Cell Physiol	2005	Ponsot E, Zoll J, N'guessan B, Ribera F, Lampert E, Richard R, Veksler V, Ventura-Clapier R, Mettauer B (2005) Mitochondrial tissue specificity of substrates utilization in rat cardiac and skeletal muscles. J Cell Physiol 203:479-86.
Lane 2005 Oxford Univ Press	2005	Lane N (2005) Power, sex, suicide: Mitochondria and the meaning of life. Oxford University Press. 354 pp.
Toleikis 2005 Biosci Rep	2005	Toleikis A, Trumbeckaite S, Majiene D (2005) Cytochrome C effect on respiration of heart mitochondria: influence of various factors. Biosci Rep 25:387-97.
Mogensen 2005 Acta Physiol Scand	2005	Mogensen M, Sahlin K (2005) Mitochondrial efficiency in rat skeletal muscle: influence of respiration rate, substrate and muscle type. Acta Physiol Scand 185:229-36.
Nussbaum 2005 J Clin Invest	2005	Nussbaum RL (2005) Mining yeast in silico unearths a golden nugget for mitochondrial biology. J Clin Invest 115:2689-91. https://doi.org/10.1172/JCI26625
MiPNet10.09 MiP2005	2005	Gnaiger E, ed (2005) Mitochondrial physiology. The many faces and functions of an organelle. MiP2005 Abstracts. Mitochondr. Physiol. Network 10.09: 1-152.
Shadel 2005 Trends Biochem Sci	2005	Shadel GS (2005) Mitochondrial DNA, aconitase 'wraps' it up. Trends Biochem Sci 30:294-6. https://doi.org/10.1016/j.tibs.2005.04.007
Somero 2005 Annu Rev Physiol	2005	Somero G, Suarez RK (2005) Peter Hochachka: Adventures in biochemical adaptation. Annu Rev Physiol 67:25-37.
Thayer 2005 Thesis	2005	Thayer TC (2005) Critical role of superoxide production in the pathogenesis of autoimmune diabetes. University of Pittsburgh, School of Medicine, PhD Thesis: 152pp.